Package: tAI 0.2.2
tAI: The tRNA Adaptation Index
Functions and example files to calculate the tRNA adaptation index, a measure of the level of co-adaptation between the set of tRNA genes and the codon usage bias of protein-coding genes in a given genome. The methodology is described in dos Reis, Wernisch and Savva (2003) <doi:10.1093/nar/gkg897>, and dos Reis, Savva and Wernisch (2004) <doi:10.1093/nar/gkh834>.
Authors:
tAI_0.2.2.tar.gz
tAI_0.2.2.zip(r-4.7)tAI_0.2.2.zip(r-4.6)tAI_0.2.2.zip(r-4.5)
tAI_0.2.2.tgz(r-4.6-any)tAI_0.2.2.tgz(r-4.5-any)
tAI_0.2.2.tar.gz(r-4.7-any)tAI_0.2.2.tar.gz(r-4.6-any)
tAI_0.2.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
tAI/json (API)
| # Install 'tAI' in R: |
| install.packages('tAI', repos = c('https://mariodosreis.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mariodosreis/tai/issues
- ecolik12 - E. coli K-12 codon bias and tRNA numbers
Last updated from:3a2057dfb0. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 106 | ||
| source / vignettes | OK | 198 | ||
| linux-release-x86_64 | OK | 101 | ||
| macos-release-arm64 | OK | 138 | ||
| macos-oldrel-arm64 | OK | 174 | ||
| windows-devel | OK | 52 | ||
| windows-release | OK | 56 | ||
| windows-oldrel | OK | 61 | ||
| wasm-release | OK | 95 |
Exports:get.sget.taiget.wsnc.adjnc.fts.test
Dependencies:
